Final Program
Sunday, September 4th, 2016
15:00 – 20:00 Registration
17:30 Opening (Ganesh Kumar Agrawal, INPPO President)
Public Evening Lecture
18:00 – 18:30 Dominique Job: Plant proteomics, with a special focus on seeds
20:00 – 22:00 Welcome Reception
Monday, September 5th, 2016
8:00 – 9:20 Registration, Poster Mounting
Session I: Systems Biology
Chair: Frank Menke
9:20 – 10:00 Wolfram Weckwerth: Green Systems Biology – the need for ecological thinking
10:00 – 10:20 Natalia Bykova: Integration of quantitative proteomics, redox metabolomics and proteogenomics to identify sources of seed dormancy control and pre-harvest sprouting resistance in wheat
10:20 – 10:40 Antoine Champagne: A comprehensive proteome map of glandular trichomes of hop (Humulus lupulus L.) female cones: One shot for the entire biosynthetic pathways of terpenoid-related compounds and possible transport proteins
10:40 – 11:00 Julia Svozil: Identification of proteins binding to sense and antisense RNA pairs
11:00 – 11:20 Coffee break
Session II: Posttranslational Modifications
Chair: Jay Thelen
11:20 – 11:40 Ella Nukarinen: The central role of SnRK1 in low energy syndrome
11:40 – 12:00 Ing-Feng Chang: Proteomic and phosphoproteomic profiling of leaves from two natural variants of Imperata cylindrica
12:00 – 12:40 Round table I
12:40 – 14:00 Lunch break
Special Session: Joint session of COST and INPPO
Chairs: Vassilis Fotopoulos and Martin Hajduch
14:00 – 14:40 Jay Thelen: Phosphoproteomic resources and technologies – from discovering phosphorylation sites to identifying kinase clients
14:40 – 15:20 Frank Menke: Targeting post translational modifications in plant immunity signaling
15:20 – 15:40 Michel Zivy: Contribution of quantitative proteomics to the analysis of maize responses to drought stress
15:40 – 16:00 Leonor Guerra-Guimaraes: Two resistance inducers relevant in coffee plant protection show distinct metabolic adjustments
16:00 – 16:20 Christine Finnie: Exploring the plant-microbe interface by profiling the surface-associated proteins of barley grains
16:20 – 16:40 Coffee break
16:40 – 17:00 Klara Kosova: Proteomic analysis of wheat and barley response to abiotic and biotic stress factors using gel-based proteomic approaches
17:00 – 17:20 Stephanie Wienkoop: Molecular plasticity during drought recovery is characterized by protein turnover dynamics and translational regulation in Medicago truncatula
18:30 – 21:00 Poster Viewing
Tuesday, September 6th, 2016
Session III: Sub-cellular Proteomics
Chair: Jenny Renaut
9:00 – 9:30 Ian Max Møller: The plant mitochondrial proteome
9:30 – 9:50 Yann Gohon: Structural proteomics: Use of synchrotron light to map water accessible surface of oil body interacting proteins
9:50 – 10:10 Daisuke Takahashi: Changes of extracellular matrix in response to cold and sub-zero acclimation in Arabidopsis
10:10 – 10:30 Coffee break
10:30 – 10:50 Harriet T. Parsons: Dissecting organelles with proteomics; the Golgi cisternae and ER sub-compartments revealed
10:50 – 11:10 Tomáš Takáč: Actin depolymerization-induced changes in proteome of Arabidopsis roots
11:10 – 11:30 Kjell Sergeant: The difference 2 Da makes
11:30 – 14:00 Lunch break
Session IV: Growth and Development
Chair: Dominique Job
14:00 – 14:30 Jozef Šamaj: Comparative proteomics of Arabidopsis MAPK mutants with developmental defects
14:30 – 14:50 Palak Chaturvedi: Comprehensive pollen proteomics: an evidence for developmental priming
14:50 – 15:10 Chiew Foan Chin: Proteomic analysis of callus proliferation in tissue culture of tropical crops
15:10 – 15:40 Chang-Hsien Yang: A RING-Type E3 ligase controls ovule development by negatively regulating a key enzyme in the process of lignin synthesis in Arabidopsis
15:40 – 16:00 Coffee break
Special session: Minute poster presentations
Chair: Maksym Danchenko
16:00 – 17:30 Jazmin Abraham, Namik Rashydov, Reinhard Turetschek, Valentin Roustan, Lucyna Domżalska, Shiori Koga, Thierry Chardot, Sebastian Schneider, Ravi Gupta, Yunqi Wu, Jenny Renaut, Arindam Ghatak, Kristina Majsec, Anna Rita Trentin,
17:30 – 20:00 Poster Viewing
Wednesday, September 7th, 2016
Session V: Plant and Pathogen Interaction
Chair: Carla Pinheiro
9:00 – 9:30 Laurence Bindschedler: Exploring the battlefield of an obligate plant pathogen by proteomics and gene silencing: the case of barley powdery mildew
9:30 – 9:50 Letizia Bernardo: Novel insight about plant root interaction with arbuscular mycorrhiza by proteomics approach
9:50 – 10:10 Christof Rampitsch: Redox proteomics identifies redox-sensing protein targets by NADPH oxidase in Fusarium graminearum
10:10 – 10:30 Coffee break
10:30 – 11:00 Stephanie Wienkoop: Dissecting microbial and cultivar related influences of the defense response of Pisum sativum against Didymella pinodes
11:00 – 11:20 Katja Witzel: Comparative proteomic analysis of tomato roots colonized by the soil-borne pathogen Verticillium dahlia
Special Session: Use of Proteomics for Regulatory Science
Chair: Martin Hajduch
11:20 – 11:50 Hubert Chassaigne: Proteomics for the safety assessment of nanomaterials from the regulatory science perspective
11:50 – 12:20 Jay Thelen: Absolute quantification of soy allergens using mass spectrometry: Comparison of genetics versus environment on allergen load
12:20 – 14:00 Lunch break
Session VI: Proteomics of Abiotic Stress
Chair: Sebastien Carpentier
14:00 – 14:30 Setsuko Komatsu: Quantitative proteomics reveals initial-response mechanism in soybean under flooding stress
14:30 – 15:00 Luis Valledor: Systems Biology, a novel way for discovering new biomarkers of abiotic stress resistance and wood quality in Pinus radiate
15:00 – 15:20 Annelie Gutsch: The cell wall as shield against cadmium toxicity: Proteome changes in the cell wall of alfalfa stems and leaves exposed to cadmium
15:20 – 15:40 Silvia Mazzuca: Exploring leaf proteome of marine plants toward ocean acidification
15:40 – 16:00 Claudia-Nicole Meisrimler: Pea proteomics: Iron deficiency and induced systemic resistance – what are the links?
16:00 – 16:20 Jens Beator: How abiotic factors in growth chambers affect plant growth and experimental results
16:20 – 16:40 Coffee break
Session VII: Proteomics and Breeding
Chair: Michel Zivy
16:40 – 17:10 Erik Andreasson: Potato proteomics for increased pathogen resistance
17:10 – 17:30 Bongani Ndimba: Agricultural proteomic in South Africa and applications of proteomics in agricultural biotechnology research
17:30 – 17:50 Brian P. Mooney: Quantitative proteomics of Zea mays hybrids exhibiting different levels of heterosis
19:00 Conference Dinner and Poster Awards
Thursday, September 8th, 2016
9:00 – 10:00 Round table II
10:00 – 10:30 INPPO Scientific Committee Meeting
10:30 Closing, Poster dismounting, Farewell